Three thoughts I had: engine, PCM, torque converter. Engine seems to be an UHOH with the Flex for some reason. You noticed change after KAM reset, that means the adapations are not working, either because there is something wrong with the engine/control system, or the PCM is at fault. Torque converter because if it has issues, it will keep locking/unlocking with no change in load/throttle input whatsover.
No codes being set COULD point to a faulty PCM, has happened with prev Gen SHOs, so still a possibility here.
What oil/filter are you using? What gas? Any oil leaks in the plug wells or deposits on the plugs? Valve cover gasket leaks do happen, and can cause misfiring symptoms.
Are you monitoring lambda/afr? Any fuel smell out the exhaust, any smoke? Checked the intercooler and turbo piping for pooling oil? How much boost are you seeing?
Def post logs. Our membership may be able to figure out what's off ...