Got some good news to report, the car is back to running normal again. So after talking with my friend, he recommended me to his mechanic that was familiar with Ecoboost engines, mainly the f150 but close enough.. After running his fancy scan tool to see if there were any misfires or hidden codes he found nothing. He pulled one of the coils to see if it would throw a code and it did. After resetting the ecu and clearing the code the car now runs good again.. The only thought I have is, even after having the battery disconnected and doing a KAM reset twice on my SCT X4, the ecu needed to relearn when I switched plugs and MSD coils