If I really wanted assurance about the engine, I'd have it blueprinted first. For the Gen I's & II's, FPS in Atlanta used to (still might) offer those services in addition to the gofast upgrades for Gen I & Gen II SHOs. If you are going to have it bluepriinted, might as well get a built block out of it.
Short of that, I'd let the engine "break in" first, datalog as much as I could with Torque Pro/Forscan just to get familiar with it. Give it a 1000 miles or so. THEN load up a tune and fire away, using only Top Tier gasoline and full synthetic engine oil. I have advocated giving a tuned car the best diet & maintenance if you want it to last, and I still do. No skimping on fluids/fluid change intervals. What more can a person do? Beyond that, it's chance/fate.